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Medicinal Chemistry

Terms

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Goal of QSAR
we want to design a drug that has the lowest concentration in the blood for the desired biological effect.
Physicochemical Features Quantified in QSAR
Hydrophobicity, electronics, sterics all relate to Biological Activity
Tips for QSAR
calculate in advance what the biological activity of novel analogue might be target efforts on analogues which should have improved.
QSAR ATTEMPS...
qsar attempts to identify and quantify the physiochemical properties of a drug and to see whether any of these properties has an effect on the drugs biological activity.
QSAR STANDS FOR:
Quantitative Structure Activity Relationships
Isoteric replace ment of a Methyl group with a...
Amino Group
Isosteric
H2N
dont get what you want
Lysergic Acid- LSD
Stratigies of Drug Development
-simplification of the structure -variation of the substituents -chain extensions/contractions -ring expansion -ring variations
Development of a NOVEL DRUG from a natural source.
-Determination sturcture -synthesis of analogues -structure activity relationships -Enzyme target site and mechanism -design and synthesis of novel drug structures
Standard pattern of Drug development
1st discover bio activity in crude extract isolation of the molecule stucture determination
Standard pattern of Drug Development 1st step
-first find active agent as starting point i.e. natural products(plants, marine organisms for example)
3 objectives for medicinal chemist to develop drugs
1. to increase activity 2. reduce side effects 3. provide easy and efficient administration to the patient
pharmacokinectics
the fate of a drug in the body
pharmocodynamics
the efficacy and toxicity of a drug.
more hydrophillic the drug
the lower the partition coefficient
more hydrophobic drug
higher partition coefficient
hydrophillic compounds prefer to dissolve in
an aqueous solution
hydrophobic compounds dissolve in
octanol
partition coefficient
(concetration of drug in Octanol)/( concentration of drug in Aqueous Solution)
Hydrophobic drug charcteristics
Enzyme active site has a hydrophobic region Too: hydrophobic will be poorly soluble in blood trapped in fat deposits, more susceptible to metabolic break down in liver

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